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ABRomicsKG

An antimicrobial resistance knowledge graph

URI: https://10-54-3-233.gcp.glicid.fr

Name: ABRomicsKG

Classes

Class Description
Agent An agent is something that bears some form of responsibility for an activity ...
CellularOrganism A cellular organism as defined in the NCBI taxonomy
Gene A functional unit of heredity which occupies a specific position on a particu...
ObservableProperty An observable quality (property, characteristic) of a sosa:FeatureOfInterst
Observation An observation made by a workflow on the sequencing files of a biological sam...
Person
Procedure A workflow, protocol, plan, algorithm, or computational method specifying how...
Region 2D or 3D defined space on something, mainly in terrestrial and astrophysics s...
Sample A sample containing some sort of biological material
SampleSource A physical biological object, like an organ or a physical object such as soil...
Sensor The sequencer instrument that was used to generate the sequencing files from ...

Slots

Slot Description
atLocation Indicates the region where the sample has been collected
generatedAtTime Indicates the exact time and date when the sample has been collected
hasFeatureOfInterest A relation between an Observation and the entity whose quality was observed
hasSimpleResult The simple value of an Observation
host Indicates the host specie the sample has been collected from
inTaxon Indicates the taxons present in the sample
isAbout Indicates that the observation has been made about a certain sample
isPartOf Indicates the type of the sample
isSubjectOf Indicates the observations performed by a workflow on the biological samples'...
label A string that represents the name of sequencer used to generate the sequencin...
observedProperty A property of interest measured by the workflow on the seqencing file
resultTime The result time is the instant of time when the Observation was completed
usedProcedure A relation to link to a re-usable Procedure used in making an Observation
wasAttributedTo Indicates the sequencer used to observe the biological sample leading to the ...
wasDerivedFrom Indicates the physical biological object that has been collected in the sampl...
wasGeneratedBy Generation is the completion of production of a new entity by an activity

Enumerations

Enumeration Description
SampleType

Types

Type Description
Boolean A binary (true or false) value
Curie a compact URI
Date a date (year, month and day) in an idealized calendar
DateOrDatetime Either a date or a datetime
Datetime The combination of a date and time
Decimal A real number with arbitrary precision that conforms to the xsd:decimal speci...
Double A real number that conforms to the xsd:double specification
Float A real number that conforms to the xsd:float specification
Integer An integer
Jsonpath A string encoding a JSON Path
Jsonpointer A string encoding a JSON Pointer
Ncname Prefix part of CURIE
Nodeidentifier A URI, CURIE or BNODE that represents a node in a model
Objectidentifier A URI or CURIE that represents an object in the model
Sparqlpath A string encoding a SPARQL Property Path
String A character string
Time A time object represents a (local) time of day, independent of any particular...
Uri a complete URI
Uriorcurie a URI or a CURIE

Subsets

Subset Description